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PROCHECK source information. Result analysis. from Protein Structures. Original references. WHATCHECK. WHATCHECK documentation and source For questions about WHATCHECK results, please email the creator: vriendgert@gmail.com. saves @2024 - Contact: holton at mbi.ucla.edu for any questions.
This server will display a coloured Ramachandran plot. Blue means helix, red means strand and green means turn and loop according to DSSP. The lines in the plot indicate prefered areas.
Ramachandran Plot Generator. A Ramachandran plot is a graphical representation of the conformations of peptides and proteins based on the values of their phi and psi angles. Phi and psi are dihedral angles that describe the conformation of a protein's main chain.
Instead of using python to draw the diagram, there are also a selection of online tools to draw Ramachandran Plots for you, including: Ramachandran Server for structures deposited in the PDB , based on MOLEMAN2 by Gerard Kleywegt .
This server analyses the Ramachandran plot of a PDB file and compares it with the Ramachandran plots of about 400 representative structures solved at high resolution. Either Choose a pdb-file, Or Choose your own file
Ramachandran Plot. The Ramachandran Plot Window plots only values for the currently selected amino-acids of the current layer. The name of the current layer is drawn at the bottom left of the window. Amino-acids appear as a little cross with the exception of Gly that appears as a square.
Sep 13, 2006 · The Ramachandran Plot Explorer is designed to make it easy to examine the conformation of a polypeptide - through the interactive Ramachandran plot (φ-ψ angles) and χ-angle tool. Simply click on a residue, then drag the marker on the Ramachandran plot.
