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ShinyGO: a graphical gene-set enrichment tool for animals and plants. (ShinyGO V0.77). over 2000 users did. http://ge-lab.org/go/ Email Jenny Twitter LinkedIn. Customized ShinyGO Form. GO Enrichment analysis, plus a lot more!
This tutorial explains how to perform Gene Ontology (GO) Enrichment Analysis using ShinyGO (a cloud R Shiny server). ShinyGO is an online graphical interface...
ShinyGO is an intuitive, graphical tool for enrichment analysis. Even though its species coverage is not as broad as DAVID, ShinyGO has more comprehensive ge...
Dec 27, 2019 · Taking advantage of the Shiny framework, which enable access to many powerful R packages for visualization and statistical analyses, we developed a new tool based on the annotation database at Ensembl and pathway databases from many other sources.
Nov 3, 2019 · Just paste your gene list to get enriched GO terms and othe pathways for over 315 plant and animal species, based on annotation from Ensembl (Release 96), Ensembl plants (R. 43) and Ensembl Metazoa (R. 43).
Gene ontology analysis is a powerful tool that enables researchers to uncover the biological function of genes, and it has become an essential component of g...
Dec 27, 2019 · ShinyGO is an intuitive, graphical web application that can help researchers gain actionable insights from gene lists, based on a large annotation database derived from Ensembl and STRING-db for 59 plant, 256 animal, 115 archaeal, and 1678 bacterial species. Expand. View PDF. Save to Library.
May 4, 2018 · ShinyGO is an intuitive, graphical web application that can help researchers gain actionable insights from gene lists. Availability: http://ge-lab.org/go/ Example outputs of ShinyGO. (A) A...
Based on gene onotlogy (GO) annotation and gene ID mapping of 315 animal and plant genomes in Ensembl BioMart release 96 as of 5/20/2019. In addition, 115 archaeal, 1678 bacterial, and 238 eukaryotic genomes are annotated based on STRING-db v10.
May 4, 2018 · To complement existing tools, we developed ShinyGO with several features: (1) large annotation database from GO and many other sources for over 200 plant and animal species, (2) graphical visualization of enrichment results and gene characteristics, and (3) application program interface (API) access to KEGG and STRING for the retrieval of ...
