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PDBsum1 is a standalone version of PDBsum Generate for local installation and running. It generates the same analyses as PDBsum, with the added advantage of allowing you direct access to the computed data.
Feb 25, 2009 · PDBsum provides summary information about each experimentally determined structural model in the Protein Data Bank (PDB). Some of its most recent features include figures from the structure's key reference, citation data, Pfam domain diagrams, topology diagrams and protein-protein interactions.
The RCSB PDB also provides a variety of tools and resources. Users can perform simple and advanced searches based on annotations relating to sequence, structure and function. These molecules are visualized, downloaded, and analyzed by users who range from students to specialized scientists.
PDBsum contains a number of protein structures that may be of interest in structure-based drug design. One branch of PDBsum, known as DrugPort, focuses on these models and is linked with the DrugBank drug target database.
Oct 27, 2017 · A PDBsum page is generated for every structure submitted to ProFunc. Finally, LigSearch predicts small molecule ligands that might bind to a given protein (submitted as a sequence or structure). It, too, is intimately linked to PDBsum.
