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Enrichr can now accept BED files as input for enrichment. Enrichr automatically converts the BED file into a gene list. The species supported are human and mouse. The maximum number of genes to produce from the bed file can be adjusted.
enrichR provides an interface to the Enrichr database (Kuleshov et al. 2016) hosted at https://maayanlab.cloud/Enrichr/. By default human genes are selected otherwise select your organism of choice. (This functionality was contributed by Alexander Blume)
Jul 8, 2016 · Enrichment analysis is a popular method for analyzing gene sets generated by genome-wide experiments. Here we present a significant update to one of the tools in this domain called Enrichr. Enrichr currently contains a large collection of diverse gene set libraries available for analysis and download.
Chen EY, Tan CM, Kou Y, Duan Q, Wang Z, Meirelles GV, Clark NR, Ma'ayan A. Enrichr: interactive and collaborative HTML5 gene list enrichment analysis tool. BMC Bioinformatics. 2013;128(14) .
May 11, 2023 · Here we describe a web-server application called Enrichr Knowledge Graph (Enrichr-KG) which combines enrichment analysis with a knowledge graph data representation to query a large collection of processed datasets made of associations between genes and many biological and biomedical terms.
Jul 8, 2016 · Enrichment analysis is a popular method for analyzing gene sets generated by genome-wide experiments. Here we present a significant update to one of the tools in this domain called Enrichr. Enrichr currently contains a large collection of diverse gene set libraries available for analysis and downloa …
'Enrichr' is a web-based tool for analysing gene sets and returns any enrichment of common annotated biologi-cal features. Quoting from their website 'Enrichment analysis is a computational method for in-ferring knowledge about an input gene set by comparing it to annotated gene sets represent-ing prior biological knowledge.'
