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  1. saves.mbi.ucla.eduSAVESv6.1 - Structure Validation Server

    References. Reference: Verification of protein structures: patterns of nonbonded atomic interactions, Colovos C and Yeates TO, 1993. Profile Search Software [Bowie et al., 1991, Luethy et al., 1992].

    • Usage

      UCLA-DOE LAB — SAVES v6.1. Usages - Number of Jobs (not...

  2. www.doe-mbi.ucla.edu › SAVESSAVES – UCLA-DOE Institute

    Jul 15, 2021 · Structure Analysis and Validation. SAVES has been in operation since 2004 and is currently operating version 6. It is an interactive validation server for 5 programs commonly used in protein structure validation.

  3. www.sciencedirect.com › science › articleProtein structure prediction - ScienceDirect

    Jan 1, 2022 · The SAVES v6.0 (https://saves.mbi.ucla.edu/) is a comprehensive toolkit and has five tools (ERRAT, VERIFY3D, PROVE, PROCHECK, and WHAT CHECK), which predict different types of stereochemical parameters of the protein structure. The Ramachandran plot predicts the structural stereochemical property.

    • Shikha Agnihotry, Rajesh Kumar Pathak, Dev Bukhsh Singh, Apoorv Tiwari, Imran Hussain
    • 2022

  4. www.ncbi.nlm.nih.gov › pmc › articlesQuantitative structure‐activity relationship and molecular ...

    Feb 16, 2017 · Model validation is performed using version four of Structure Analysis and Verification Server (SAVES) (https://services.mbi.ucla.edu/SAVES/).

    • Abdo A Elfiky, Samah M Mahdy, Wael M Elshemey
    • 10.1002/jmv.24736
    • 2017
    • J Med Virol. 2017 Jun; 89(6): 1040-1047.

  5. www.researchgate.net › figure › Model-validation-byModel validation by using SAVES (PROCHECK) server here the ...

    TOPCONS web server provides the presence of an alpha-helical region in this protein. Secondary structure prediction and Three-dimensional (3D) modeling of this protein were done by using PSIPRED...

  6. saves.mbi.ucla.edu › usageSAVESv6.1 - Structure Validation Server

    3 days ago · UCLA-DOE LAB — SAVES v6.1. Usages - Number of Jobs (not individual programs running) New Job Thursday, September 26, 2024 : 565 jobs up to 10:19 am America/Los_Angeles.

  7. www.ebi.ac.uk › thornton-srv › softwarePROCHECK home page - EMBL-EBI

    Sep 14, 2023 · PROCHECK checks the stereochemical quality of a protein structure, producing a number of PostScript plots analysing its overall and residue-by-residue geometry. It includes PROCHECK-NMR for checking the quality of structures solved by NMR.