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Download NOTE: The latest stable version of AutoDock Vina can be downloaded from the GitHub repository. Older versions are available here. OS Files Installation instructions autodock_vina_1_1_2_linux_x86.tgz See instructions Linux
AutoDock Vina is an open-source program for doing molecular docking. It was originally designed and implemented by Dr. Oleg Trott in the Molecular Graphics Lab (now CCSB) at The Scripps Research Institute. The latest version is available here. AutoDock Vina is one of the docking engines of the AutoDock Suite.
AutoDock Tools Compatibility. For its input and output, Vina uses the same PDBQT molecular structure file format used by AutoDock. PDBQT files can be generated (interactively or in batch mode) and viewed using MGLTools. Other files, such as the AutoDock and AutoGrid parameter files (GPF, DPF) and grid map files are not needed.
Vina Video Tutorial This tutorial demonstrates molecular docking of imatinib using Vina with AutoDock Tools and PyMOL. Note that the version of Vina used in the tutorial is now old, so some differences are unavoidable. Specifically, the program option "all" is now called "out", and the predicted binding affinity is different in the current version of the software.
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Search for: Documentation mgl-admin 2019-03-16T15:02:02+00:00. Documentation Title
Changes – AutoDock Vina. 1.1.1 -> 1.1.2: * Bug fix: the affinities reported with flexible side chains were. sometimes incorrect. (This problem had no effect on the predicted. binding modes or their relative ranking, or on rigid receptor. docking) * Bug fix: the individual term values, before weighting, reported.
Feb 28, 2019 · Still under very active development! By David S. Goodsell | 2019-02-28T00:45:29+00:00 February 28th, 2019 | Uncategorized | Comments Off on Welcome to the new home page
Still under very active development! By David S. Goodsell | 2019-02-28T00:45:29+00:00 February 28th, 2019 | Uncategorized | Comments Off on Welcome to the new home page
