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the archive for microRNA sequences and annotations.
Browse miRBase by species (271 organisms) Jump to: human mouse rat fly worm Arabidopsis. Click taxa to expand and collapse the tree. Click species names to list microRNAs. Key: species name (miRNA count) [assembly version] Expand all. Collapse all. Alveolata.
miRBase is a database of microRNA sequences and annotations with downloadable data in various formats.
Sep 3, 2018 · The miRBase:Targets database predict targets in the UTRs of 37 different animal genomes from Ensembl [5,7]. miRBase provides a list of mRNAs overlapping each miRNA defining its type (intron, UTR or exon) and the sense (forward or reverse) [7]. miRNAs are often clustered within a genome, therefore, miRBase provides a list of such miRNAs which ...
microRNA. "The miRBase database is a searchable database of published miRNA sequences and annotation. Each entry in the miRBase Sequence database represents a predicted hairpin portion of a miRNA transcript (termed mir in the database), with information on the location and sequence of the mature miRNA sequence (termed miR).
Full name: microRNA database. Description: miRBase is the central repository for microRNA (miRNA) sequence information. miRBase has a role in defining the nomenclature for miRNA genes and assigning names to novel miRNAs for publication in peer-reviewed journals.
miRBase is the central repository for microRNA (miRNA) sequence information. miRBase has a role in defining the nomenclature for miRNA genes and assigning names to novel miRNAs for publication in peer-reviewed journals.
miRBase is a database of published miRNA sequences and annotations that provides a centralised system for assigning names to miRNA genes . Overview. 65,389 RNA sequences from 271 organisms contributed to RNAcentral. the shortest sequence has 15 nucleotides, the longest 2,354. the average length is 55 nucleotides. database version: 22.1.
In mammals, predictions are ranked based on the predicted efficacy of targeting as calculated using a biochemical model of miRNA-mediated repression, which was extended to all miRNA sequences using a convolutional neural network ( McGeary, Lin, et al., 2019 ).
miRNA.dead - List of entries that have been removed from the database
