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KEGG is a database resource for understanding high-level functions and utilities of the biological system, such as the cell, the organism and the ecosystem, from molecular-level information, especially large-scale molecular datasets generated by genome sequencing and other high-throughput experimental technologies.
The KEGG database project was initiated in 1995 under the Japanese Human Genome Project, foreseeing the need for a reference resource that would enable understanding of the biological systems, such as the cell and the organism, from genome sequence data.
Jun 26, 2024 · KEGG PATHWAY is a collection of manually drawn pathway maps representing our knowledge of the molecular interaction, reaction and relation networks for: 1. Metabolism
May 22, 2024 · KEGG GENOME is a collection of KEGG organisms, which are the organisms with complete genome sequences and each of which is identified by the three- or four-letter organism code.
May 21, 2021 · KEGG GENES is a collection of genes and proteins in complete genomes of cellular organisms and viruses generated from publicly available resources, mostly from NCBI RefSeq and GenBank, and annotated by KEGG in the form of KO (KEGG Orthology) assignment.
KEGG ( Kyoto Encyclopedia of Genes and Genomes) is a collection of databases dealing with genomes, biological pathways, diseases, drugs, and chemical substances.
Apr 1, 2024 · KEGG organisms - list of currently available organisms with organism codes and organism group names Enter (examples) hsa mmu sce eco bsu syn. Associated tools and documents. Tool: Content: DBGET: Integrated database retrieval system: KEGG Mapper: KEGG mapping tools: KEGG Web Apps: Javascript-based web applications: KEGG Syntax: Conserved gene order analysis: KEGG Annotation: KO assignment and analysis: BlastKOALA GhostKOALA KofamKOALA: Automatic KO assignment server: BLAST
Commercial companies are requested to obtain proper KEGG licenses when they make use of KEGG in their research and other activities. Pathway Solutions operates a KEGG data download site and a mirror site of KEGG web services for licensed users.
About KEGG. The KEGG database is a computer model of the biological information systems in the cell, the organism and the biosphere represented in terms of molecular interaction and reaction networks.
Jan 1, 2024 · KEGG mapping is the process to map molecular objects (genes, proteins, small molecules, etc.) to molecular network objects (KEGG pathway maps, BRITE hierarchies and KEGG modules). It is not simply an enrichment process; rather it is a set operation to generate a new set.
