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1. www.ebi.ac.uk › thornton-srv › softwarePDBsum - EMBL-EBI

   www.ebi.ac.uk › thornton-srv › software

   PDBsum1 is a standalone version of PDBsum Generate for local installation and running. It generates the same analyses as PDBsum, with the added advantage of allowing you direct access to the computed data. Click on Installation in the lefthand menu for download instructions. Example PDBsum 1 pages for PDB entry 1coh.

   • Installation

     The parameters you need to define are: OPERATING_SYSTEM -...

   • Manual

     The results of the PDBsum1 run are listed in the index.html...

   • Contact Us

     An important part of EMBL-EBI’s mission is to disseminate...

   • PDBsum Generate

     EMBL-EBI homepage | EMBL-EBI

   • Resources and Software

     PDBsum is a pictorial database providing an at-a-glance...

   • PDBSum

     PDBsum: a comprehensive database of 3D structures in the...

   • Generate

     Explore the structure and function of any protein complex or...

2. www.ebi.ac.uk › thornton-srv › databasesEMBL-EBI homepage | EMBL-EBI

   www.ebi.ac.uk › thornton-srv › databases

   PDBsum: a comprehensive database of 3D structures in the Protein Data Bank. Browse, search and visualize protein molecules, interactions and functions.

3. ebi.ac.uk › thornton-srv › databasesEMBL-EBI

   ebi.ac.uk › thornton-srv › databases

   Explore the structure and function of any protein complex or macromolecule with PDBsum Generate, a powerful and flexible tool from EMBL-EBI.

4. www.ebi.ac.uk › pdbe › entryPDB 9end structure summary ‹ Protein Data Bank ... - EMBL-EBI

   www.ebi.ac.uk › pdbe › entry

   • Cached

   6 days ago · 9end: Navigating the conformational landscape of an enzyme. Stabilization of a low populated conformer by evolutionary mutations triggers Allostery into a non-allosteric enzyme.

5. www.ebi.ac.uk › pdbeHomepage | Protein Data Bank in Europe - EMBL-EBI

   www.ebi.ac.uk › pdbe

   • Cached

   Homepage | Protein Data Bank in Europe. PDBe is a founding member of the Worldwide Protein Data Bank (wwPDB) which collects, organises and disseminates data on biological macromolecular structures. wwPDB Partners: RCSB PDB, PDBj , BMRB, EMDB. Read more about PDBe.

6. www.ebi.ac.ukEMBL-EBI homepage | EMBL-EBI

   www.ebi.ac.uk

   • Cached

   EMBL-EBI is a leading institute in computational biology, offering data resources and tools for life science research.

7. People also ask

   What is PDBsum?

   • PDBsum is a pictorial database that provides an at-a-glance overview of the contents of each 3D structure deposited in the Protein Data Bank ( PDB ). It shows the molecule (s) that make up the structure (ie protein chains, DNA, ligands and metal ions) and schematic diagrams of the interactions between them.

   PDBsum home page - EMBL-EBI

   www.ebi.ac.uk/thornton-srv/databases/pdbsum/

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   What is pdbsum1?

   • PDBsum1 is a standalone version of PDBsum Generate for local installation and running. It generates the same analyses as PDBsum, with the added advantage of allowing you direct access to the computed data. Click on Installation in the lefthand menu for download instructions.

   PDBsum1 home page - EMBL-EBI

   www.ebi.ac.uk/thornton-srv/software/PDBsum1/

   See all results for this question

   What is the European Bioinformatics Institute (EMBL-EBI)?

   • The European Bioinformatics Institute (EMBL-EBI) is part of EMBL, Europe’s flagship laboratory for the life sciences.

   The European Bioinformatics Institute < EMBL-EBI

   www.ebi.ac.uk/

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   What is the difference between NLM and PDBsum?

   • As a library, NLM provides access to scientific literature. Inclusion in an NLM database does not imply endorsement of, or agreement with, the contents by NLM or the National Institutes of Health. Protein Sci. 2018 Jan; 27 (1): 129–134. PDBsum is a web server providing structural information on the entries in the Protein Data Bank (PDB).

   PDBsum: Structural summaries of PDB entries - PMC

   www.ncbi.nlm.nih.gov/pmc/articles/PMC5734310/

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8. www.ncbi.nlm.nih.gov › pmc › articlesPDBsum: Structural summaries of PDB entries - PMC

   www.ncbi.nlm.nih.gov › pmc › articles

   Oct 27, 2017 · PDBsum is a web server providing structural information on the entries in the Protein Data Bank (PDB). The analyses are primarily image‐based and include protein secondary structure, protein‐ligand and protein‐DNA interactions, ...