Search results
Clustal Omega is a new multiple sequence alignment program that uses seeded guide trees and HMM profile-profile techniques to generate alignments between three or more sequences. For the alignment of two sequences please instead use our pairwise sequence alignment tools.
Clustal Omega is the latest addition to the Clustal family. It offers a significant increase in scalability over previous versions, allowing hundreds of thousands of sequences to be aligned in only a few hours. It will also make use of multiple processors, where present.
Pairwise Alignment: FAST/APPROXIMATE SLOW/ACCURATE. Enter your sequences (with labels) below (copy & paste): PROTEIN DNA. Support Formats: FASTA (Pearson), NBRF/PIR, EMBL/Swiss Prot, GDE, CLUSTAL, and GCG/MSF. Or give the file name containing your query.
At minimum, Clustal Omega requires an input file containing multiple sequences, accepting both multi-fasta and existing alignment formats. # Run Clustal Omega clustalo -i my_sequences.fasta -o my_msa.fasta # -i means input, -o means output
Dec 9, 2020 · Clustal Omega [ 1] is a package for performing fast and accurate multiple sequence alignments (MSAs) of potentially large numbers of protein or DNA/RNA sequences. It is the latest version of the popular and widely used Clustal MSA package [ 2, 3 ].
Oct 30, 2017 · Clustal Omega is a widely used package for carrying out multiple sequence alignment. Here, we describe some recent additions to the package and benchmark some alternative ways of making alignments.
Aug 30, 2012 · Multiple alignment of nucleic acid and protein sequences Clustal Omega Latest version of Clustal - fast and scalable (can align hundreds of thousands of sequences in hours), greater accuracy due to new HMM alignment engine
