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CASTp 3.0: Computed Atlas of Surface Topography of proteins. Please cite this paper if you publish or present results using CASTp analysis: Tian et al., Nucleic Acids Res. 2018. PMID: 29860391 DOI: 10.1093/nar/gky473. The enhanced CASTpFold server with new features for the whole protein universe is online, check here: CASTpFold.
How does CASTp work. >> References. How to cite CASTp.
The enhanced CASTpFold server with new features for the whole protein universe is online, check here: CASTpFold. For questions and bugs, please contact uic.lianglab {at}gmail.com . Upload a molecular structure in standard PDB format. No multiple NMR structures please, and all nonpolar H atoms will be ignored. file_upload File.
Jun 1, 2018 · The CASTp server identifies all surface pockets, interior cavities and cross channels in a protein structure and provides detailed delineation of all atoms participating in their formation. It also measures their exact volumes and areas, as well as sizes of the mouth openings if exist.
Jul 1, 2003 · Computed Atlas of Surface Topography of proteins (CASTp) provides an online resource for locating, delineating and measuring concave surface regions on three-dimensional structures of proteins. These include pockets located on protein surfaces and voids buried in the interior of proteins.
Computer Atlas of Surface Topography of Proteins (CASTp) aims to provide comprehensive and detailed quantitative characterization of topographic features of protein, is now updated to version 3.0. Since its release in 2006, the CASTp server has ≈45000 visits and fulfills ≈33000 calculation requests annually.
Jul 1, 2006 · CASTp (http://cast.engr.uic.edu) is an online tool that locates and measures pockets and voids on 3D protein structures. This new version of CASTp includes annotated functional information of specific residues on the protein structure.
Feb 2, 2018 · Computed Atlas of Surface Topography of proteins (CASTp) has been a useful resource for locating, delineating and measuring these concave surface regions, and for providing information of amino acid residue sites of functions and diseased-related single nucleotide polymorphisms (SNPs).
CASTp is based on recent theorectical and algorithmic results of Computational Geometry.
Jul 1, 2006 · CASTp ( http://cast.engr.uic.edu) is an online tool that locates and measures pockets and voids on 3D protein structures. This new version of CASTp includes annotated functional information of specific residues on the protein structure.
