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RCSB PDB Batch Download Service. 222,624 Structures from the PDB. 1,068,577 Computed Structure Models (CSM) Download Multiple Files from the PDB Archive. For downloading large amounts of data files, users are encouraged to use this shell script for batch download.
Jul 16, 2011 · RCSB Protein Data Bank (RCSB PDB) enables breakthroughs in science and education by providing access and tools for exploration, visualization, and analysis of: Experimentally-determined 3D structures from the Protein Data Bank (PDB) archive. Computed Structure Models (CSM) from AlphaFold DB and ModelArchive.
PDB entry files are available in several file formats (PDB, PDBx/mmCIF, XML, BinaryCIF), compressed or uncompressed, and with an option to download a file containing only "header" information (summary data, no coordinates).
PDB Archive Downloads. New Sequence and InChI. Data Structure and Content. Download Protocols. Please note that the FTP file download protocol in the PDB archive will be deprecated on November 1st 2024 ( announcement ). The PDB archive and versioned archive are updated every Wednesday at 00:00 UTC.
Use this page to download coordinate files and experimental data files, FASTA sequence files, and ligand data files for one or many PDB entries or small molecules. Enter PDB or small molecule IDs and click 'Download' to save a compressed folder containing your files onto your local disk.
Rich information about all PDB entries, multiple search and browse facilities, advanced services including PDBePISA, PDBeFold and PDBeMotif, advanced visualisation and validation of NMR and EM structures, tools for bioinformaticians.
Guide to Understanding PDB Data is designed to help you get started with finding and exploring the hundreds of thousands of 3D structures in the PDB archive. If you’re new to the world of structural biology, start with Introduction to the PDB.
Tools are provided to search the PDB dictionary for chemical components, to identify structure entries containing particular small molecules, and to download the 3D structures of the small molecule components in the PDB entry.
About PDB-101 Testing instance. Researchers around the globe make 3D structures freely available from the Protein Data Bank (PDB) archive. PDB-101 training materials help graduate students, postdoctoral scholars, and researchers use PDB data and RCSB PDB tools.
The RCSB PDB offers two ways to access data through application programming interfaces (APIs): REST-based API: refer to the full REST-API documentation. GraphQL-based API: use in-browser Graph i QL tool to refer to the full schema documentation.
