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BV-BRC is a comprehensive database and analysis platform for bacterial and viral genomes and their hosts. It integrates data and tools from PATRIC, IRD and ViPR, and provides various ways to access and manage data.
- Data and Functionality Overview (for PATRIC Users) | BV-BRC
BV-BRC has been developed by starting with the legacy PATRIC...
- PATRIC to BV-BRC Final Transition Schedule | BV-BRC
We are now in the final phase of transitioning PATRIC to the...
- Data and Functionality Overview (for PATRIC Users) | BV-BRC
Jan 1, 2020 · PATRIC supports bioinformatic analyses of all bacteria with a special emphasis on pathogens, offering a rich comparative analysis environment that provides users with access to over 250 000 uniformly annotated and publicly available genomes with curated metadata.
- James J. Davis, James J. Davis, Alice R. Wattam, Alice R. Wattam, Ramy K. Aziz, Thomas S. Brettin, T...
- 10.1093/nar/gkz943
- 2019
- 2020/01/01
BV-BRC is a comprehensive resource for bacterial and viral pathogens, integrating data, tools, and services from PATRIC, IRD, and ViPR. Learn how to access and use the new and enhanced features for genome annotation, homology search, phylogenetic analysis, and more.
Jul 31, 2017 · The Pathosystems Resource Integration Center (PATRIC, www.patricbrc.org) is designed to provide researchers with the tools and services that they need to perform genomic and other ‘omic’ data analyses.
- Dionysios A. Antonopoulos, Rida Assaf, Ramy Karam Aziz, Thomas S. Brettin, Christopher Bun, Neal Con...
- 10.1093/bib/bbx083
- 2019
- Brief Bioinform. 2019 Jul; 20(4): 1094-1102.
Aug 16, 2022 · PATRIC, a bacterial bioinformatics resource center, is merging with IRD/ViPR, a viral bioinformatics resource center, to form BV-BRC. Learn about the new features, data, tools, and services in BV-BRC and the transition timeline and help options.
Jan 1, 2017 · Model reconstruction. With the release of the Model Reconstruction service, users can construct their own metabolic model for any genome in PATRIC. The service includes support for model gap-filling, Flux Balance Analysis (FBA), essential gene prediction and export of models in SBML format.
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PATRIC is a platform for bacterial research and analysis, integrating pathogen information and data from various sources. It is free to access with registration and developed by MSKCC.