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PRATT. version 2.1. PRATT is a tool to discover patterns conserved in a set of protein sequences. This tool can also be run from the EBI server with very similar modalities. STEP 1 - Enter a set of PROTEIN sequences or an alignment. Examples. Supported input: Sequences in FASTA or UniProtKB/Swiss-Prot format.
PROSITE Documentation. PROSITE. PROSITE User Manual. PROSITE profile syntax. List of abbreviations for journals cited. Description of sequence logos. Useful links. SARS-CoV-2 relevant PROSITE motifs. ProRule.
The ProRule section of PROSITE is constituted of manually created rules that increase the discriminatory power of PROSITE motifs (generally profiles) by providing additional information about functionally and/or structurally critical amino acids and can automatically generate annotation based on PROSITE motifs in the UniProtKB/Swiss-Prot format.Each ProRule is defined in the UniRule format [ More...
This resource is released under the PROSITE license. What you can do with this resource . Sequence analysis , Protein structure analysis , ...
PROSITE currently consists of a large collection of biologically meaningful motifs that are described as patterns or profiles, and linked … Among the various databases dedicated to the identification of protein families and domains, PROSITE is the first one created and has continuously evolved since.
PROSITE consists of documentation entries describing protein domains, families and functional sites, as well as associated patterns and profiles to identify them. It is complemented by ProRule, a collection of rules based on profiles and patterns, which increases the discriminatory power of these profiles and patterns by providing additional information about functionally and/or structurally critical amino acids.
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